mirror of https://github.com/attractivechaos/klib
9dcbb97e0e | ||
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lua | ||
README | ||
kbtree.h | ||
kbtree_test.c | ||
kfunc.c | ||
khash.h | ||
khash_keith.c | ||
khash_keith2.c | ||
khash_test.c | ||
khmm.c | ||
khmm.h | ||
klist.h | ||
klist_test.c | ||
kmin.c | ||
kmin.h | ||
kmin_test.c | ||
knetfile.c | ||
knetfile.h | ||
knhx.c | ||
knhx.h | ||
kseq.h | ||
kseq_bench.c | ||
kseq_bench2.c | ||
kseq_test.c | ||
kseq_test.dat | ||
ksort.h | ||
ksort_test.c | ||
ksort_test.cc | ||
kstring.c | ||
kstring.h | ||
kstring_bench.c | ||
kstring_bench2.c | ||
ksw.c | ||
ksw.h | ||
kvec.h | ||
kvec_test.cc |
README
INTRODUCTION ============ Klib is a standalone and lightweight C library. Most components are independent of external libraries, except the standard C library, and independent of each other. To use a component of this library, you only need to copy one or two files to your souce code tree without worrying about library dependencies. Klib strives for efficiency and a small memory footprint. Some components, such as khash.h, kbtree.h, ksort.h and kvec.h, are among the most efficient implementations of similar algorithms or data structures, while using less memory than many others. OVERVIEW ======== khash.h Generic hash table kbtree.h Generic B-tree ksort.h Generic sort kseq.h Generic stream buffer plus a FASTA/Q parser kvec.h Generic vector klist.h Generic single-linked list plus a memory pool kstring.{h,c} String library knetfile.{h,c} Random access to remote files kfunc.c Special mathematical functions kmin.{h,c} Derivative-free non-linear programming khmm.{h,c} Basic HMM library knhx.{h,c} Newick format parser LICENSE ======= Most of the source codes are released under the MIT/X11 or the BSD license.