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fixed a stupid bug

This commit is contained in:
Heng Li 2011-05-05 19:32:03 -04:00
parent f5f13055ec
commit 765cb6c1d1
1 changed files with 4 additions and 4 deletions
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ksw.c
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@ -50,11 +50,11 @@ ksw_query_t *ksw_qinit(int p, int qlen, const uint8_t *query, int m, const int8_
slen = (qlen + p - 1) / p;
qlen16 = (qlen + 15) >> 4 << 4;
q = malloc(sizeof(ksw_query_t) + 256 + qlen16 * (m + 2)); // a single block of memory
q = malloc(sizeof(ksw_query_t) + 256 + qlen16 * (m + 3)); // a single block of memory
q->qp = (__m128i*)(((size_t)q + sizeof(ksw_query_t) + 15) >> 4 << 4); // align memory
q->H0 = q->qp + qlen16 * m;
q->H1 = q->H0 + qlen16;
q->E = q->H1 + qlen16;
q->H0 = q->qp + (qlen16 * m) / 16;
q->H1 = q->H0 + qlen16 / 16;
q->E = q->H1 + qlen16 / 16;
q->slen = slen;
// compute shift
tmp = m * m;