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bugfix: 2nd best score not set

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because I was comparing (uint32_t)-1 with a positive integer...
This commit is contained in:
Heng Li 2013-02-12 17:37:14 -05:00
parent fd9cee5312
commit 0636685258
1 changed files with 3 additions and 3 deletions
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6
ksw.c
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@ -211,7 +211,7 @@ end_loop16:
low = te - i; high = te + i;
for (i = 0; i < n_b; ++i) {
int e = (int32_t)b[i];
if ((e < low || e > high) && b[i]>>32 > (uint32_t)r.score2)
if ((e < low || e > high) && (int)(b[i]>>32) > r.score2)
r.score2 = b[i]>>32, r.te2 = e;
}
}
@ -311,7 +311,7 @@ end_loop8:
low = te - i; high = te + i;
for (i = 0; i < n_b; ++i) {
int e = (int32_t)b[i];
if ((e < low || e > high) && b[i]>>32 > (uint32_t)r.score2)
if ((e < low || e > high) && (int)(b[i]>>32) > r.score2)
r.score2 = b[i]>>32, r.te2 = e;
}
}
@ -587,7 +587,7 @@ int main(int argc, char *argv[])
return 1;
}
if (minsc > 0xffff) minsc = 0xffff;
if (minsc > 0) xtra |= KSW_XSUBO | minsc;
xtra |= KSW_XSUBO | minsc;
// initialize scoring matrix
for (i = k = 0; i < 4; ++i) {
for (j = 0; j < 4; ++j)