diff --git a/bootstrap b/bootstrap
index e28762c6..d95a4312 100755
--- a/bootstrap
+++ b/bootstrap
@@ -17,5 +17,4 @@ automake_libdir="$(automake --print-libdir)"
 mkdir -p build-aux
 cp "${automake_libdir}/install-sh" build-aux
 
-autoconf
-( cd toolchain-detect && autoconf )
+autoreconf -fvi
diff --git a/configure.ac b/configure.ac
index 20c2c351..cfd193c6 100644
--- a/configure.ac
+++ b/configure.ac
@@ -3,6 +3,7 @@ AC_INIT([Limine], m4_esyscmd([./version.sh]), [https://github.com/limine-bootloa
 AC_PREREQ(2.69)
 
 AC_CONFIG_AUX_DIR([build-aux])
+AC_CONFIG_SUBDIRS([toolchain-detect])
 
 SRCDIR="$(cd "$srcdir" && pwd -P)"
 BUILDDIR="$(pwd -P)"
diff --git a/toolchain-detect/configure.gnu b/toolchain-detect/configure.gnu
new file mode 100644
index 00000000..a3c4c486
--- /dev/null
+++ b/toolchain-detect/configure.gnu
@@ -0,0 +1,3 @@
+#! /bin/sh
+
+exit 0